(a) Genetic causes
Chromosomal disorders include all intellectual disability caused by a proven chromosomal aberration or a clinically obvious chromosomal syndrome such as Down syndrome. However, chromosome analysis should be performed in Down syndrome because translocation, mosaicism, or other abnormalities are found in 5 per cent of cases. Chromosomal anomalies associated with intellectual disability account for up to 40 per cent of severe cases, and 10 to 20 per cent of mild cases.
(3,6,12,13) However, the detection rates for chromosome abnormalities with the novel molecular karyotyping methods, such as micro
array-based
comparative
genomic
hybridization (
array CGH), range from 5 to 17 per cent in individuals with normal results from prior routine cytogenetic testing.
(14) Array CGH has the ability to detect any genomic imbalance including deletions, duplications, aneuploidies, and amplifications.
Malformations due to microdeletion include many malformation syndromes whose causative agent is obscure. A new method of using DNA probes and fluorescence in situ hybridization has increased understanding of the causes of syndromes such as the Angelman, Cornelia de Lange, CATCH 22 (
cardiac defects,
abnormal face,
thymic hypoplasia,
cleft palate, and
hypocalcaemia) (velocardiofacial syndrome), Miller-Dieker, Prader-Willi, Rubinstein-Taybi, Smith-Magenis, Sotos, Williams, and Wolf-Hirschhorn syndromes. Parental imprinting modifies the expression of the genes involved in the Prader-Willi and Angelman syndromes.
(12, 14,15,16)
Subtelomeric deletions or
chromosomal rearrangements have been found in some persons with intellectual disability of hitherto unknown aetiology. Subtelomeric aberrations may explain up to 5 to 10 per cent of previously unknown causes.
(13,15)
Single-gene disorders include states with intellectual disability in which the pedigree is highly suggestive of a single-gene origin. Some are caused by a mutant gene with simple Mendelian inheritance. Single-gene mutations may increase or diminish in frequency in areas with long-standing populations of the same origin, or in populations isolated by language or culture. For example, the so-called Finnish
disease heritage includes 36 disorders, from which 10 manifest with central nervous symptoms and some others may have them.
(17) Most of the specific disorders due to mutant gene have characteristic clinical phenotypic features, but there are a considerable number of non-syndromic individuals, especially in early infancy.
(12,18,19)
Autosomal dominant inheritance causes tuberous sclerosis, myotonic dystrophy, Gorlin syndrome, neurofibromatosis I, Apert syndrome, Menkes syndrome, and Huntington’s disease.
Autosomal recessive inheritance is the cause of most metabolic diseases with intellectual disability. These diseases include phenylketonuria, homocystinuria, maple syrup urine disease, aspartylglucosaminuria, mannosidosis, Salla disease, I-cell disease, mucopolysaccharidoses (except type II), neuronal ceroid lipofuscinoses, Tay-Sachs disease, metachromatic leucodystrophy, Smith-Lemli-Opitz syndrome, and Joubert syndrome.
X-linked inherited disorders include the fragile X, Aicardi, Lesch-Nyhan, Lowe, Norrie, and Coffin-Lowry syndromes, mucopolysaccharidosis II, Duchenne muscular dystrophy, α-thalassaemia intellectual disability syndrome, and Rett syndrome. The most
common intellectual disability syndrome caused by mutation of a single gene is fragile X syndrome. The pattern of its inheritance is X-linked dominant with decreased penetrance.
(17,19,20) The prevalence of the 24 other genes identified to date in the X chromosome is low.
(20) Dystrophic myotony, fragile X syndrome, and Huntington’s disease are caused by so-called
dynamic mutation in which the length of the repeated sequence of three DNA bases can vary from generation to generation increasing the variability in the phenotype.
(21) In Rett syndrome female inactivation of X chromosome may be skewed. It explains the existing of the syndrome in a male or the very mild phenotype in a female.
(22) Epigenetic regulatory factors are also involved in the aetiology of Rett syndrome.
(23)
Mitochondrial disorders are inherited in most cases due to mutations in the
nuclear genes encoding proteins targeted to this organelle. Autosomal dominant, recessive, or X-linked inheritances are possible. In addition, mitochondrial dysfunction is shown among others in patients with fragile-X, Rett, and Wolf-Hirschhorn syndromes or autism.
(24,25,26,27) Mitochondrial DNA (mtDNA) is inherited maternally. Sporadic deletions and duplications are also found (Kearns-Sayre syndrome, sporadic deletion or partial duplication in mtDNA). Examples of the maternally inherited (mtDNA) syndromes with central nervous symptoms are the MELAS (mitochondrial myopathy, encephalomyopathy, lactic acidosis, and stroke-like episodes), MERRF (myoclonus epilepsy with ragged red fibres), and NARP (neurogenic muscle weakness, ataxia, retinitis pigmentosa), FSFD (facio-scapulo-femoral muscular dystrophy, familial cerebellar ataxia, recurrent Reye syndrome, cerebral palsy with intellectual disability), and cytochrome c oxidase (COX) deficiency (deafness, myoclonic epilepsy, ataxia, and intellectual disability
) syndromes. Nuclear genes are often involved in mitochondrial DNA depletion and Leigh syndromes, which are severe progressive diseases in early childhood.
(11, 18, 21)
Multifactorial intellectual disability may be a state of
pure familial intellectual disability or associated to some
multifactorially inherited conditions, for example neural-tube defects. One or more first-degree relatives are also affected. Similar pervasive developmental disorders or childhood or other psychoses in one or more of first-degree relatives or otherwise strong family background suggest a polygenic component of intellectual disability.
(12, 21)